Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs112940461 | chr16:74478166 | ACT/A | 0.000527 | 208 | 14.1 | 19.9 | 15.12 | KM Plot |
KIRP | rs112971523 | chr14:59875162 | T/C | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
KIRP | rs112974730 | chr10:74974560 | TG/T | 5.94E-12 | 212 | 17 | 7.27 | 5.6 | KM Plot |
KIRP | rs113008896 | chr14:59881808 | A/C | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
KIRP | rs113088041 | chr14:59939457 | ACT/A | 0.000243 | 214 | 16.45 | 14.58 | 6.63 | KM Plot |
KIRP | rs113099043 | chr4:88214273 | C/A | 0.000556 | 211 | 17 | 12.93 | 12.47 | KM Plot |
KIRP | rs1131095 | chr3:49714225 | T/C | 0.000366 | 214 | 14.13 | 16.7 | 23.63 | KM Plot |
KIRP | rs113136336 | chr19:43180556 | G/A | 0 | 212 | 16.43 | 13.17 | 2.38 | KM Plot |
KIRP | rs113172694 | chr14:59998219 | T/C | 0.000251 | 212 | 16.43 | 16.53 | 11.2 | KM Plot |
KIRP | rs113253356 | chr10:74895426 | C/T | 5.24E-12 | 213 | 16.53 | 12.4 | 5.6 | KM Plot |
KIRP | rs113273187 | chr17:7895312 | C/T | 0.000327 | 211 | 16.43 | 15.33 | 11.2 | KM Plot |
KIRP | rs11330512 | chr9:139374451 | CA/C | 0.000445 | 204 | 13.95 | 14.85 | 30.1 | KM Plot |
KIRP | rs113305148 | chr4:88248743 | C/A | 0.000666 | 205 | 16.73 | 15.33 | 12.47 | KM Plot |
KIRP | rs11331742 | chr3:99971773 | CT/C | 1.85E-5 | 204 | 16.93 | 16.53 | 4.53 | KM Plot |
KIRP | rs113438985 | chr4:88159671 | C/T | 0.000506 | 214 | 17.03 | 11.67 | 14.1 | KM Plot |